Basic Statistics
Measure | Value |
---|---|
Filename | PiuraChilensis_Valdivia_trimmer_out.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 683347 |
Filtered Sequences | 0 |
Sequence length | 32-431 |
%GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CTTTCGTACTATTTCTCTGTTTTTTTAAAAGAAAAAATCTAAACTAGGTC | 1084 | 0.15863097372198898 | No Hit |
TTTCGTACTATTTCTCTGTTTTTTTAAAAGAAAAAATCTAAACTAGGTCG | 909 | 0.13302172980930624 | No Hit |
CCTTTCGTACTATTTCTCTGTTTTTTTAAAAGAAAAAATCTAAACTAGGT | 793 | 0.1160464595586137 | No Hit |
TCCTTTCGTACTATTTCTCTGTTTTTTTAAAAGAAAAAATCTAAACTAGG | 747 | 0.10931488687299426 | No Hit |
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TTTTT | 1141385 | 2.462982 | 6.093003 | 20-24 |