|
..
|
|
.ipynb_checkpoints
|
|
Bayesian updating of pulldown interactions.ipynb
|
|
Building full protein list 0.2.ipynb
|
|
Building full protein list.0.1.ipynb
|
|
Building training set.ipynb
|
|
Classifier Training HIPPIE.ipynb
|
|
Classifier Training.ipynb
|
|
Community Detection.ipynb
|
|
Creating HIPPIE training set.ipynb
|
|
Creating Training Set.ipynb
|
|
Creating pgf graphs.ipynb
|
|
Data Visualisation HIPPIE.ipynb
|
|
Data Visualisation.ipynb
|
|
Extracting ENTS prediction feature.ipynb
|
|
Extracting Gene Ontology features 0.1.ipynb
|
|
Extracting Gene Ontology features 0.2.ipynb
|
|
Extracting HIPPIE features.ipynb
|
|
Extracting HMR feature.ipynb
|
|
Extracting InterPreTS features.ipynb
|
|
Extracting InterologWalk features.ipynb
|
|
Extracting MultiLoc2 features.ipynb
|
|
Extracting STRING results-based features.ipynb
|
|
Extracting gene expression features 0.1.ipynb
|
|
Extracting gene expression features 0.2.ipynb
|
|
Extracting iRefIndex features.ipynb
|
|
Feature extraction code development notes.ipynb
|
|
Fixing acronyms in the report.ipynb
|
|
Full Pipeline Prototype.ipynb
|
|
Generating STRING weighted edges.ipynb
|
|
Inspecting ENTS code.ipynb
|
|
Investigating qi_evaluation_2006.ipynb
|
|
Misc.ipynb
|
|
Mysterious database problem.ipynb
|
|
Parallel processing notes.ipynb
|
|
Pulldown abundance feature extraction.ipynb
|
|
Pulldown affinity feature extraction.ipynb
|
|
Pulldown interactions.ipynb
|
|
Replicating Qi 2006.ipynb
|
|
Required packages.ipynb
|
|
Table formatting.ipynb
|
|
Testing Biopython with Entrez-IDs.ipynb
|
|
Training and test featureset generation.ipynb
|
|
ocbio.extract usage notes.ipynb
|