import planktonator as plktor
import os
# Path to images to extract particles from
path = '../../img/'
# Path for particles to be saved to
output = '../../particles/'
# Input image dimensions
height, width = 1230,1600
# Project name
project = 'planktonator_test'
# Run Planktonator Particle Extractor
plktor.run.extract_particles(path,output)
# Run Planktonator Particle Measurements
plktor.run.measure_particles(output,height,width,project=project)
# Zip Data - ready to be imported in EcoTaxa
plktor.tools.zipcompress(output,zipf=os.path.join(path,project))