#!/usr/bin/env python
# coding: utf-8

# In[17]:


import planktonator as plktor
import os


# In[18]:


# Path to images to extract particles from
path        = '../../img/'
# Path for particles to be saved to
output      = '../../particles/'
# Input image dimensions
height, width = 1230,1600
# Project name 
project = 'planktonator_test'


# In[19]:


# Run Planktonator Particle Extractor
plktor.run.extract_particles(path,output)


# In[20]:


# Run Planktonator Particle Measurements 
plktor.run.measure_particles(output,height,width,project=project)


# In[21]:


# Zip Data - ready to be imported in EcoTaxa
plktor.tools.zipcompress(output,zipf=os.path.join(path,project))