#!/usr/bin/env python
# coding: utf-8

# # Summary plots and HTML output

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get_ipython().run_line_magic('matplotlib', 'inline')
get_ipython().run_line_magic('pylab', 'inline')
from gdsctools import anova
matplotlib.rcParams['figure.figsize'] = (10,6)


# ##  HTML Report

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from gdsctools import *


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an = ANOVA(ic50_test)


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results = an.anova_all()


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report = ANOVAReport(an, results)


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# This can take a while since it created all HTML and PNG images
# This will be created in a directory called html_gdsc_anova by default
# See settings notebook for details
report.settings.animate = False
report.create_html_pages(onweb=False)


# ## Manual summary plot

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df = report.drug_summary()


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df = report.feature_summary()


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df = report.get_significant_hits()


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# you can create an individual HTML page e.g. the MANOVA page
report.create_html_manova()


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